NCEAS Working Groups
Paleobiology Database
Project Description
Our picture of global diversification and extinction on long time scales is mostly based on generalized data for Phanerozoic marine macroinvertebrates. While every effort was made to guarantee the comprehensiveness of this data set, the community has been aware that sampling artifacts may contribute to the observed trends. Until now, we have been unable to remove these effects. Several robust methods for doing this are now available, but these methods use locality-specific data that are not a part of the existing, more generalized compilations. In order to confirm the reality of the major observed patterns, a collaborative data compilation project needs to be initiated. We wish to form a working group to do this. As a first step, we propose a workshop this August involving workers who have specialized in analyzing paleontological diversity data. This workshop will determine the scope, goals, structure, and time table of a database project. Immediately after the workshop, a post-doc who will serve as project coordinator will begin a two-year residency at NCEAS. Over the following two years, experts specializing on particular parts of the fossil record will meet at NCEAS to guide the data collection process. A final meeting will focus on preparing collaborative publications showing how these data influence our picture of marine diversification and extinction.
Principal Investigator(s)
John Alroy, Charles R. Marshall, Arnold I. Miller
Project Dates
Start: February 16, 2001
End: August 4, 2009
completed
Participants
- Martin Aberhan
- Zentralinstitut der Humboldt-Universitaet zu Berlin
- John Alroy
- University of California, Santa Barbara
- Ayse Atakul
- Orta Dogu Teknik Universitesi
- Richard K. Bambach
- Harvard University
- Anna K. Behrensmeyer
- Smithsonian Institution
- Karen Bezusko
- University of Cincinnati
- Jessica Blois
- Stanford University
- David J. Bottjer
- University of Southern California
- Paul Bown
- University College London
- C. Kevin Boyce
- Harvard University
- Mara Brady
- Macalester College
- Chris Brochu
- Field Museum of Natural History
- Ann F. Budd
- University of Iowa
- Devin Buick
- University of Cincinnati
- Andres Cardenas
- Unknown
- Matthew Carrano
- State University of New York (SUNY), Stony Brook
- William C. Clyde
- University of New Hampshire
- Andrea Cobbett
- University of Bath
- Taniel Danelian
- Université Pierre et Marie Curie
- Vladimir Davydov
- Boise State University
- Felipe De La Parra
- University of Florida
- Brad Deline
- University of Cincinnati
- William A. DiMichele
- Smithsonian Institution
- Patrick Diver
- DivDat Consulting
- James A. Doyle
- University of California, Davis
- Gunther Eble
- University of Leipzig
- Gregory Ederer
- University of California, Santa Barbara
- Douglas Erwin
- Smithsonian Institution
- Emmanuel Fara
- Université de Montpellier II
- Zoe Finkel
- State University of New Jersey, Rutgers
- Michael Foote
- University of Chicago
- Mikael Fortelius
- University of Helsinki
- Franz T. Fursich
- Universitat Wurzburg, Germany
- Robert A. Gastaldo
- Colby College
- Patricia G. Gensel
- University of North Carolina
- Sylvain Gerber
- Jessica Gilner
- Florida Institute of Technology
- Ann Goewert-Nonneman
- University of North Carolina, Chapel Hill
- Stephen Goodyear
- University of Texas, Austin
- David Harper
- Geologisk Museum
- David Harwood
- University of Nebraska, Lincoln
- Jason Head
- Smithsonian Institution
- Austin J.W. Hendy
- University of Cincinnati
- Steven M. Holland
- University of Georgia
- Kathy Hollis
- University of Colorado, Boulder
- Brian Huber
- Smithsonian National Museum of Natural History
- Nigel Hughes
- University of California, Riverside
- John P. Hunter
- New York College of Osteopathic Medicine
- Linda C. Ivany
- Syracuse University
- David Jablonski
- University of Chicago
- Phillip Jardine
- University of Birmingham
- Jukka Jernvall
- University of Helsinki
- Kirk R. Johnson
- Denver Museum of Nature and Science
- Mimi Katz
- State University of New Jersey, Rutgers
- Susan Kidwell
- University of Chicago
- Wolfgang Kiessling
- Humboldt-University Berlin
- Andy Knoll
- Harvard University
- Sarah Kolbe
- Unknown
- Dieter Korn
- Humboldt-University Berlin
- Matthew A. Kosnik
- University of Chicago
- Michal Kowalewski
- Virginia Polytechnic Institute and State University
- Andrew Zack Krug
- Pennsylvania State University
- Michal Kucera
- University of London
- Conrad Labandeira
- Smithsonian Institution
- David Lamb
- University of California, Santa Barbara
- Harold Lane
- National Science Foundation
- David Lazarus
- Humboldt-University Berlin
- Erin Leckey
- University of California, Santa Barbara
- Jackie Lees
- University College London
- Soizic Le Fur
- Université de Poitiers
- Scott Lidgard
- Field Museum
- Graeme Lloyd
- University of Bristol
- Cindy Looy
- Smithsonian Institution
- Richard Lupia
- University of Oklahoma
- Murat Maga
- University of Texas, Austin
- Charles R. Marshall
- Harvard University
- Ronald Martin
- University of Delaware
- Jin Meng
- American Museum of Natural History
- Arnold I. Miller
- University of Cincinnati
- Elise Nardin
- Université de Bourgogne
- Karl J. Niklas
- Cornell University
- Richard Norris
- University of California, San Diego
- Michael Nowak
- Duke University
- Matthew O'Donnell
- Pennsylvania State University
- F. Robin O'Keefe
- New York College of Osteopathic Medicine
- Tom Olszewski
- Smithsonian National Museum of Natural History
- John Orcutt
- University of Oregon
- Mark E. Patzkowsky
- Pennsylvania State University
- Shanan E. Peters
- Hermann Pfefferkorn
- University of Pennsylvania
- Roy E. Plotnick
- University of Illinois, Chicago
- David Polly
- Indiana University
- Anne Raymond
- Texas A and M University
- P.M. (Allister) Rees
- University of Arizona
- Raymond R. Rogers
- Macalester College
- Kaustuv Roy
- University of California, San Diego
- Sarda Sahney
- University of Bristol
- Claire Samant
- Université de Poitiers
- Jocelyn A. Sessa
- University of Cincinnati
- Chris Sidor
- Smithsonian Institution
- Hallie J. Sims
- Smithsonian Institution
- Dena Smith
- University of Colorado Museum
- Krister Smith
- Yale University
- Michael Sommers
- University of California, Santa Barbara
- Susan Standen
- Case Western Reserve University
- William Stein
- State University of New York (SUNY), Binghamton
- Bruce Tiffney
- University of California, Santa Barbara
- Adam Tomasovych
- Universitat Wurzburg, Germany
- Susumu Tomiya
- University of California, Berkeley
- Mark D. Uhen
- Cranbrook Institute of Science
- Bryan G. Valencia
- Henk Visscher
- Universiteit Utrecht
- Peter J. Wagner
- Field Museum
- Patrick D. Wall
- Syracuse University
- Hongshan Wang
- University of Florida
- Xiaoming Wang
- Natural History Museum of Los Angeles County
- Mark Webster
- University of Chicago
- Vera Weisbecker
- University of New South Wales
- Michael Weiser
- University of Arizona
- Lars Werdelin
- Swedish Museum of Natural History
- Jill Wertheim
- University of California, Santa Barbara
- Robin Whatley
- Smithsonian Institution
- Peter Wilf
- Pennsylvania State University
- Richard D. Wilkinson
- Downing College
- Scott Wing
- Smithsonian Institution
- Sherwood W. Wise
- Florida State University
- Jeremy Young
- Natural History Museum, London
Products
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Journal Article / 2006
Testing the role of biological interactions in the evolution of mid-Mesozoic marine benthic ecosystems
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Journal Article / 2001
A multispecies overkill simulation of the end-Pleistocene megafaunal mass extinction
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Journal Article / 2002
How many named species are valid
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Journal Article / 2002
Stratigraphy in phylogeny reconstruction - reply to Smith (2000)
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Journal Article / 2003
Cenozoic bolide impacts and biotic change in North American mammals
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Journal Article / 2003
Global databases will yield reliable measures of global biodiversity
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Journal Article / 2003
Taxonomic inflation and body mass distributions in North American fossil mammals
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Journal Article / 2004
Are Sepkoski's evolutionary faunas dynamically coherent?
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Data Set / 2004
Paleobiology database
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Journal Article / 2008
Dynamics of origination and extinction in the marine fossil record
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Journal Article / 2008
Phanerozoic trends in the global diversity of marine invertebrates
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Book Chapter / 2009
Speciation and extinction in the fossil record of North American mammals
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Journal Article / 2005
Are the most durable shelly taxa also the most common in the marine fossil record?
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Journal Article / 2008
How are global patterns of faunal turnover expressed at regional scales? Evidence from the Upper Mississippian (Chesterian), Illinois Basin, USA
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Journal Article / 2006
A quantitative study of benthic faunal patterns within the Pennsylvanian and early Permian
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Journal Article / 2008
A test of biogeographical, environmental, and ecological effect on Middle and Late Triassic brachiopod and bivalve abundance patterns
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Journal Article / 2008
Understanding mechanisms for the end-Permian mass extinction and the protracted Early Triassic aftermath and recovery
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Journal Article / 2002
Mammalian dispersal at the Paleocene/Eocene boundary
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Journal Article / 2008
How green was Cooksonia? The importance of size in understanding the early evolution of physiology in the vascular plant lineage
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Journal Article / 2004
Did alpha diversity increase through the Phanerozoic? Lifting the veils of taphonomic, latitudinal, and environmental biases
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Journal Article / 2004
Removing bias from diversity curves: The effects of spatially organized biodiversity on sampling-standardization
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Journal Article / 2009
Zenostephanus, a new name for the genus xenostephanus arkell and callomon 1963 (molllusca, cephalopoda), preoccupied by xenostephanus simpson, minoprio and patterson, 1962 (mammalia)
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Journal Article / 2006
Assessing the ecological dominance of Phanerozoic marine invertebrates
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Journal Article / 2001
Global Ordovician faunal transitions in the marine benthos: Proximate causes
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Journal Article / 2001
Joint estimation of sampling and turnover rates from fossil databases: Capture-mark-recapture methods revisited
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Journal Article / 2002
Global Ordovician faunal transitions in the marine benthos: Ultimate causes
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Journal Article / 2007
Mirrabella, a new name for the genus Mirabella De Bruijn et al. 1987 (Mammalia), preoccupied by Mirabella Emeljanov 1982 (Insecta)
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Journal Article / 2007
Identifying forested environments in Deep Time using fossil tapirs: Evidence from evolutionary morphology and stable isotopes
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Journal Article / 2007
Environmental correlates of the cercopithecoid radiations
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Journal Article / 2002
Sea-level variations and the quality of the continental fossil record
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Journal Article / 2004
Estimating minimum global species diversity for groups with a poor fossil record: A case study of Late Jurassic-Eocene lissamphibians
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Journal Article / 2008
Body size, energetics, and the Ordovician restructuring of marine ecosystems
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Journal Article / 2008
Reworking diversity: Effects of storm deposition on evenness and sampled richness, Ordovician of the Basin and Range, Utah and Nevada, USA
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Journal Article / 2008
The Red Queen revisited: Reevaluating the age selectivity of Phanerozoic marine genus extinctions
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Journal Article / 2001
Inferring temporal patterns of preservation, origination, and extinction from taxonomic survivorship analysis
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Journal Article / 2003
Origination and extinction through the Phanerozoic: A new approach
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Journal Article / 2006
Substrate affinity and diversity dynamics of Paleozoic marine animals
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Journal Article / 2007
Extinction and quiescence in marine animal genera
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Journal Article / 2007
Symmetric waxing and waning of marine invertebrate genera
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Journal Article / 2008
On the bidirectional relationship between geographic range and taxonomic duration
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Journal Article / 2008
A null biogeographic model for quantifying the role of migration in shaping patterns of global taxonomic richness and differentiation diversity, with implications for Ordovician biogeography
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Journal Article / 2009
Stability of regional brachiopod diversity structure across the Mississippian/Pennsylvanian boundary
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Journal Article / 2009
The influence of lithification on Cenozoic marine biodiversity trends
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Book Chapter / 2011
Taphonomic overprints on Phanerozoic trends in biodiversity: Lithification and other secular megabiases
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Journal Article / 2004
Ecosystem structure and stability: Middle Upper Ordovician of central Kentucky, USA
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Journal Article / 2007
Gradient ecology of a biotic invasion: biofacies of the type Cincinnatian Series (Upper Ordovician), Cincinnati, Ohio region, USA
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Journal Article / 2009
Relative taxonomic and ecologic stability in Devonian marine faunas of New York state: A test of coordinated stasis
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Journal Article / 2009
Evidence for extinction selectivity throughout the marine invertebrate fossil record
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Journal Article / 2001
Putting limits on the diversity of life
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Journal Article / 2004
Extinction and recovery patterns of scleractinian corals at the Cretaceous-Tertiary boundary
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Journal Article / 2005
Long-term relationships between ecological stability and biodiversity in Phanerozoic reefs
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Journal Article / 2007
Environmental determinants of marine benthic biodiversity dynamics through Triassic-Jurassic time
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Journal Article / 2007
Extinction trajectories of benthic organisms across the Triassic-Jurassic boundary
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Journal Article / 2007
Geographical distribution and extinction risk: Lessons from Triassic-Jurassic marine benthic organisms
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Journal Article / 2008
Phanerozoic trends in skeletal mineralogy driven by mass extinctions
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Journal Article / 2008
Sampling-standardized expansion and collapse of reef building in the Phanerozoic
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Journal Article / 2009
An early Hettangian coral reef in southern France: Implications for the end-Triassic reef crisis
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Journal Article / 2010
Reef expansion during the Triassic: Spread of photosymbiosis balancing climatic cooling
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Journal Article / 2006
Effects of taxon abundance distributions on expected numbers of sampled taxa
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Journal Article / 2011
Changes in shell durability of common marine taxa through the Phanerozoic: Evidence for biological rather than taphonomic drivers
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Journal Article / 2006
Ecological, taxonomic, and taphonomic components of the post-Paleozoic increase in sample-level species diversity of marine benthos
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Journal Article / 2007
Body size estimates from the literature: Utility and potential for macroevolutionary studies
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Journal Article / 2004
Rapid recovery from the Late Ordovician mass extinction
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Journal Article / 2007
Geographic variation in turnover and recovery from the Late Ordovician mass extinction
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Journal Article / 2009
Ecological restructuring after extinction: The Late Ordovician (Mohawkian) of the eastern United States
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Data Set / 2008
Lockwood: Late cretaceous molluscan abundance data (Sohl and Koch)
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Data Set / 2008
Lockwood: Late Cretaceous Molluscan Abundance Data (Sohl and Koch)
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Journal Article / 2005
Incomplete sampling of geographic ranges weakens or reverses the positive relationship between an animal species' geographic range size and its body size
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Journal Article / 2006
Response to comments on Statistical ecological trends in phanerozoic marine invertebrates
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Journal Article / 2006
Response to comments on "Statistical Independence of Escalatory Ecological Trends in Phanerozoic Marine Invertebrates"
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Journal Article / 2006
Scaling water motion on coral reefs: From regional to organismal scales
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Journal Article / 2006
Statistical independence of escalatory ecological trends in phanerozoic marine invertebrates
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Journal Article / 2008
Paleobiogeography of Miocene Equinae of North America: A phylogenetic biogeographic analysis of the relative roles of climate, vicariance, and dispersal
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Journal Article / 2009
Marine mammals through time: When less is more in studying palaeodiversity
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Journal Article / 2009
Fossil plant relative abundances indicate sudden loss of late Triassic biodiversity in East Greenland
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Journal Article / 2009
Faunal diversity, heterogeneity and body size in the Early Triassic: Testing post-extinction paradigms in the Virgin Limestone of Utah, USA
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Journal Article / 2001
Substrate affinities of higher taxa and the Ordovician Radiation
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Journal Article / 2003
Increased longevities of post-Paleozoic marine genera after mass extinctions
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Journal Article / 2003
On the importance of global diversity trends and the viability of existing paleontological data
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Journal Article / 2009
Phanerozoic trends in the global geographic disparity of marine biotas
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Journal Article / 2001
A new picture of life's history on Earth
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Journal Article / 2007
Using a theoretical ecospace to quantify the ecological diversity of Paleozoic and modern marine biotas
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Journal Article / 2008
Ecosystem-wide body-size trends in Cambrian-Devonian marine invertebrate lineages
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Journal Article / 2008
Scale-dependence of Cope's rule in body size evolution of Paleozoic brachiopods
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Journal Article / 2004
A unified mathematical framework for the measurement of richness and evenness within and among multiple communities
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Journal Article / 2003
Lack of community saturation at the beginning of the Paleozoic plateau: The dominance of regional over local processes
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Journal Article / 2007
Diversity partitioning of a Late Ordovician marine biotic invasion: Controls on diversity in regional ecosystems
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Journal Article / 2007
The effect of geographic range on extinction risk during background and mass extinction
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Journal Article / 2007
The problem with the Paleozoic
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Journal Article / 2008
A sampling-adjusted macroevolutionary history for Ordovician-Early Silurian crinoids
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Journal Article / 2008
Environmental determinants of extinction selectivity in the fossil record
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Journal Article / 2010
The geological completeness of paleontological sampling in North America
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Journal Article / 2006
Round up the usual suspects: Common genera in the fossil record and the nature of wastebasket taxa
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Journal Article / 2007
Bryozoan paleoecology indicates mid-Phanerozoic extinctions were the product of long-term environmental stress
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Journal Article / 2004
Ice and its consequences: Glaciation in the Late Ordovician, Late Devonian, Pennsylvania-Permian and Cenozoic compared
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Journal Article / 2006
Phytogeography of late silurian macrofloras
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Journal Article / 2009
The impact of lithification on the diversity, size distribution, and recovery dynamics of marine invertebrate assemblages
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Journal Article / 2009
Assessing the role of abundance in marine bivalve extinction over the post-Paleozoic
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Journal Article / 2006
Brachiopod and bivalve ecology in Late Triassic (Alps, Austria): Onshore-offshore replacements caused by variations in sediment and nutrient supply
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Journal Article / 2006
Linking taphonomy to community-level abundance: Insights into compositional fidelity of the upper triassic shell concentrations (Eastern Alps)
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Journal Article / 2006
Modeling shelliness and alteration in shell beds: Variation in hardpart-input and burial rates leads to opposing predictions
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Journal Article / 2006
Preservation of autochthonous shell beds by positive feedback between increased hardpart-input rates and increased sedimentation rates
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Journal Article / 2007
Evaluating compositional turnover of brachiopod communities during the end-Triassic mass extinction (Northern Calcareous Alps): Removal of dominant groups, recovery and community reassembly
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Journal Article / 2007
Diversity estimates, biases, and historiographic effects; Resolving cetacean diversity in the Tertiary
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Journal Article / 2004
Morphological disparity of ammonoids and the mark of Permian mass extinctions
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Journal Article / 2007
Abundance distributions imply elevated complexity of post-Paleozoic marine ecosystems
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Journal Article / 2007
The effects of taxonomic standardization on sampling-standardized estimates of historical diversity
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Journal Article / 2009
Revisiting Raup: Exploring the influence of outcrop area on diversity in light of modern sample-standardization techniques
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Journal Article / 2004
Land plant extinction at the end of the Cretaceous: A quantitative analysis of the North Dakota megafloral record